STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG79995.1Predicted acetyltransferase. (402 aa)    
Predicted Functional Partners:
SDG17983.1
Competence protein ComEA.
  
    0.515
SDH02905.1
23S rRNA (adenine-N6)-dimethyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
    0.512
SDG79967.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.499
whiB-4
WhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
   
  
 0.415
SDG21925.1
Predicted arabinose efflux permease, MFS family.
   
    0.414
SDG43462.1
Predicted arabinose efflux permease, MFS family.
   
    0.414
SDG99914.1
Predicted arabinose efflux permease, MFS family.
   
    0.414
SDH10871.1
MFS transporter, ENTS family, enterobactin (siderophore) exporter.
   
    0.414
SDH11204.1
Predicted arabinose efflux permease, MFS family.
   
    0.414
SDH11689.1
Predicted arabinose efflux permease, MFS family.
   
    0.414
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.