STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG89212.1Protein kinase domain-containing protein. (529 aa)    
Predicted Functional Partners:
SDH85059.1
Protein phosphatase.
 0.862
SDI55087.1
Protein phosphatase.
 
 0.862
SDG72999.1
Zinc-ribbon domain-containing protein.
  
 
 
 0.804
SDH28195.1
Protein kinase domain-containing protein.
  
     0.775
SDG40408.1
Hypothetical protein.
   
 0.745
SDH85123.1
FHA domain-containing protein.
 
 
 
 0.666
SDH40510.1
WD40 repeat.
 
 
 0.659
SDG89247.1
Protein kinase domain-containing protein.
 
    
0.656
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.609
SDH85087.1
Inner membrane component of T3SS domain-containing protein.
 
 
 
 0.550
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.