STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG89510.1DNA-binding transcriptional regulator, AcrR family. (213 aa)    
Predicted Functional Partners:
SDG89552.1
Protein of unknown function.
 
     0.861
SDG58455.1
Suppressor of fused protein (SUFU).
  
     0.721
SDH88119.1
Sulfotransferase family protein.
  
     0.663
SDG40278.1
Uncharacterized conserved protein, LabA/DUF88 family.
  
     0.567
SDG89475.1
Fructose-1,6-bisphosphatase II.
       0.557
SDG90027.1
AAA-like domain-containing protein.
  
     0.536
SDG39863.1
GTP cyclohydrolase III.
  
     0.520
SDG31307.1
Nuclease-related domain-containing protein.
  
     0.483
SDH80270.1
RNA polymerase sigma factor, sigma-70 family.
  
     0.477
SDH50642.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.465
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.