STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH11820.1Hypothetical protein. (464 aa)    
Predicted Functional Partners:
SDH11838.1
Ribosomal protein S12 methylthiotransferase accessory factor.
 
    0.947
SDH11874.1
Ribosomal protein S12 methylthiotransferase accessory factor.
 
    0.942
SDH11790.1
Hypothetical protein.
       0.815
SDH11719.1
Predicted arabinose efflux permease, MFS family.
 
     0.766
SDH11902.1
Iron complex transport system substrate-binding protein.
 
     0.714
SDI60971.1
Ig-like domain-containing protein.
  
     0.594
SDH11547.1
Pentapeptide repeat-containing protein.
  
     0.585
SDH11956.1
Iron complex transport system ATP-binding protein.
 
     0.585
SDI61060.1
Ig-like domain-containing protein.
  
     0.557
SDI06856.1
Ribosomal protein S12 methylthiotransferase accessory factor.
 
    0.538
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.