STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH07127.1DNA-binding transcriptional regulator YhcF, GntR family. (117 aa)    
Predicted Functional Partners:
SDH07094.1
Hypothetical protein.
       0.620
SDG67610.1
DNA-binding transcriptional regulator YhcF, GntR family.
  
     0.595
SDG67573.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.476
SDG55034.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.420
SDI05414.1
GntR family transcriptional regulator.
  
    0.409
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.