STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH27994.1Regulatory protein, luxR family. (180 aa)    
Predicted Functional Partners:
SDG40408.1
Hypothetical protein.
   
 0.867
SDH01850.1
Regulatory protein, luxR family.
  
     0.726
SDH39900.1
Regulatory protein, luxR family.
  
     0.694
SDI08719.1
Histidine kinase.
 
 0.652
SDG42725.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  0.648
SDH28013.1
Methyltransferase domain-containing protein.
       0.620
SDG22233.1
Regulatory protein, luxR family.
  
     0.617
SDI00902.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
     0.587
SDH27974.1
Hypothetical protein.
       0.572
SDH17244.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
     0.541
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
Server load: low (28%) [HD]