Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG03293.1 | SDG03341.1 | SAMN05421505_101166 | SAMN05421505_101167 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.999 |
SDG03293.1 | smc | SAMN05421505_101166 | SAMN05421505_11378 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.940 |
SDG03341.1 | SDG03293.1 | SAMN05421505_101167 | SAMN05421505_101166 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.999 |
SDG03341.1 | smc | SAMN05421505_101167 | SAMN05421505_11378 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.983 |
SDG35456.1 | SDH47546.1 | SAMN05421505_103304 | SAMN05421505_11698 | Chitinase. | Chitinase. | 0.976 |
SDG35456.1 | SDH96487.1 | SAMN05421505_103304 | SAMN05421505_12842 | Chitinase. | Chitinase, GH18 family. | 0.954 |
SDG35456.1 | guaA | SAMN05421505_103304 | SAMN05421505_11739 | Chitinase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.415 |
SDG35456.1 | smc | SAMN05421505_103304 | SAMN05421505_11378 | Chitinase. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.875 |
SDG40408.1 | guaA | SAMN05421505_10419 | SAMN05421505_11739 | Hypothetical protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.584 |
SDG40408.1 | guaB | SAMN05421505_10419 | SAMN05421505_11748 | Hypothetical protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.814 |
SDG40408.1 | smc | SAMN05421505_10419 | SAMN05421505_11378 | Hypothetical protein. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.918 |
SDG93472.1 | guaB | SAMN05421505_109170 | SAMN05421505_11748 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.486 |
SDG93472.1 | smc | SAMN05421505_109170 | SAMN05421505_11378 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.614 |
SDH47546.1 | SDG35456.1 | SAMN05421505_11698 | SAMN05421505_103304 | Chitinase. | Chitinase. | 0.976 |
SDH47546.1 | SDH96487.1 | SAMN05421505_11698 | SAMN05421505_12842 | Chitinase. | Chitinase, GH18 family. | 0.964 |
SDH47546.1 | guaA | SAMN05421505_11698 | SAMN05421505_11739 | Chitinase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.415 |
SDH47546.1 | smc | SAMN05421505_11698 | SAMN05421505_11378 | Chitinase. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.875 |
SDH96487.1 | SDG35456.1 | SAMN05421505_12842 | SAMN05421505_103304 | Chitinase, GH18 family. | Chitinase. | 0.954 |
SDH96487.1 | SDH47546.1 | SAMN05421505_12842 | SAMN05421505_11698 | Chitinase, GH18 family. | Chitinase. | 0.964 |
SDH96487.1 | guaA | SAMN05421505_12842 | SAMN05421505_11739 | Chitinase, GH18 family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.415 |
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