STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH34356.1Osmotically inducible protein OsmC. (142 aa)    
Predicted Functional Partners:
SDG63722.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.845
SDG84614.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
 
  
 0.678
SDH34316.1
Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.624
SDI08719.1
Histidine kinase.
  
    0.558
SDI26491.1
PAS domain S-box-containing protein.
  
    0.537
SDG07588.1
Aldo/keto reductase family protein.
  
  
 0.486
SDH62211.1
Aldo/keto reductase.
  
  
 0.486
SDG66808.1
Hypothetical protein.
   
    0.472
SDG32280.1
Hypothetical protein.
   
    0.461
SDG42725.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
    0.461
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.