STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH38514.1Peptide/nickel transport system substrate-binding protein. (509 aa)    
Predicted Functional Partners:
SDI30866.1
Peptide/nickel transport system permease protein.
  0.832
SDG00468.1
Peptide/nickel transport system permease protein.
 
  0.827
SDG00494.1
Peptide/nickel transport system permease protein.
  0.825
SDG94903.1
Peptide/nickel transport system permease protein.
 
  0.820
SDH27048.1
Peptide/nickel transport system permease protein.
  0.816
SDH11378.1
Peptide/nickel transport system permease protein.
  0.808
SDH11403.1
Peptide/nickel transport system permease protein.
 
  0.806
SDH00061.1
Peptide/nickel transport system permease protein/glutathione transport system permease protein.
  0.804
SDH33197.1
Peptide/nickel transport system permease protein.
  0.795
SDG79420.1
Peptide/nickel transport system substrate-binding protein.
  
  
  0.785
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.