STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH40039.1Hemolysin III. (216 aa)    
Predicted Functional Partners:
SDH39750.1
Hypothetical protein.
    
  0.869
SDI37792.1
Hypothetical protein.
    
  0.869
SDH40002.1
Hypothetical protein.
       0.773
SDG84545.1
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  
 0.594
SDH40064.1
NTF2-like N-terminal transpeptidase domain-containing protein.
     
 0.592
SDH40100.1
Hypothetical protein.
       0.465
SDI47357.1
Acyl transferase domain-containing protein.
   
 
 0.457
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.452
SDH39970.1
L-lysine 6-transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.425
SDG88957.1
PhoH-like ATPase.
 
     0.413
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.