STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH46295.1DNA-binding transcriptional regulator, IclR family. (211 aa)    
Predicted Functional Partners:
SDG98572.1
DNA-binding transcriptional regulator, IclR family.
  
     0.735
SDG01385.1
DNA-binding transcriptional regulator, IclR family.
  
     0.729
SDH41422.1
DNA-binding transcriptional regulator, IclR family.
  
     0.715
SDG29120.1
DNA-binding transcriptional regulator, IclR family.
  
     0.714
SDI05441.1
DNA-binding transcriptional regulator, IclR family.
  
     0.692
SDI10586.1
IclR family transcriptional regulator, pca regulon regulatory protein.
  
     0.625
SDH57395.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
  0.491
SDG33032.1
Sensor histidine kinase inhibitor, KipI family.
  
    0.482
SDG33010.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
  
    0.463
SDH46328.1
Hypothetical protein.
       0.439
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.