Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH50268.1 | SDH50302.1 | SAMN05421505_11725 | SAMN05421505_11726 | Two component transcriptional regulator, LuxR family. | Signal transduction histidine kinase. | 0.956 |
SDH50268.1 | SDH50337.1 | SAMN05421505_11725 | SAMN05421505_11727 | Two component transcriptional regulator, LuxR family. | Phage shock protein PspC (stress-responsive transcriptional regulator). | 0.673 |
SDH50268.1 | SDH50379.1 | SAMN05421505_11725 | SAMN05421505_11728 | Two component transcriptional regulator, LuxR family. | Hypothetical protein. | 0.507 |
SDH50302.1 | SDH50268.1 | SAMN05421505_11726 | SAMN05421505_11725 | Signal transduction histidine kinase. | Two component transcriptional regulator, LuxR family. | 0.956 |
SDH50302.1 | SDH50337.1 | SAMN05421505_11726 | SAMN05421505_11727 | Signal transduction histidine kinase. | Phage shock protein PspC (stress-responsive transcriptional regulator). | 0.896 |
SDH50302.1 | SDH50379.1 | SAMN05421505_11726 | SAMN05421505_11728 | Signal transduction histidine kinase. | Hypothetical protein. | 0.507 |
SDH50337.1 | SDH50268.1 | SAMN05421505_11727 | SAMN05421505_11725 | Phage shock protein PspC (stress-responsive transcriptional regulator). | Two component transcriptional regulator, LuxR family. | 0.673 |
SDH50337.1 | SDH50302.1 | SAMN05421505_11727 | SAMN05421505_11726 | Phage shock protein PspC (stress-responsive transcriptional regulator). | Signal transduction histidine kinase. | 0.896 |
SDH50337.1 | SDH50379.1 | SAMN05421505_11727 | SAMN05421505_11728 | Phage shock protein PspC (stress-responsive transcriptional regulator). | Hypothetical protein. | 0.773 |
SDH50337.1 | SDH50413.1 | SAMN05421505_11727 | SAMN05421505_11729 | Phage shock protein PspC (stress-responsive transcriptional regulator). | Carbon monoxide dehydrogenase subunit G. | 0.408 |
SDH50379.1 | SDH50268.1 | SAMN05421505_11728 | SAMN05421505_11725 | Hypothetical protein. | Two component transcriptional regulator, LuxR family. | 0.507 |
SDH50379.1 | SDH50302.1 | SAMN05421505_11728 | SAMN05421505_11726 | Hypothetical protein. | Signal transduction histidine kinase. | 0.507 |
SDH50379.1 | SDH50337.1 | SAMN05421505_11728 | SAMN05421505_11727 | Hypothetical protein. | Phage shock protein PspC (stress-responsive transcriptional regulator). | 0.773 |
SDH50379.1 | SDH50413.1 | SAMN05421505_11728 | SAMN05421505_11729 | Hypothetical protein. | Carbon monoxide dehydrogenase subunit G. | 0.408 |
SDH50413.1 | SDH50337.1 | SAMN05421505_11729 | SAMN05421505_11727 | Carbon monoxide dehydrogenase subunit G. | Phage shock protein PspC (stress-responsive transcriptional regulator). | 0.408 |
SDH50413.1 | SDH50379.1 | SAMN05421505_11729 | SAMN05421505_11728 | Carbon monoxide dehydrogenase subunit G. | Hypothetical protein. | 0.408 |