STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH55739.1Two-component system, OmpR family, response regulator. (251 aa)    
Predicted Functional Partners:
SDG40408.1
Hypothetical protein.
  
0.994
SDH55702.1
Two-component system, OmpR family, sensor kinase.
 0.974
SDI39353.1
Hypothetical protein.
 0.950
SDH46060.1
Two-component system, OmpR family, sensor kinase.
 0.922
SDH85526.1
PAS domain S-box-containing protein.
 0.920
SDI36623.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 0.905
SDH45933.1
Two-component system, OmpR family, sensor kinase.
 0.891
SDI10830.1
Two-component system, OmpR family, sensor kinase.
 0.879
SDH31806.1
Signal transduction histidine kinase.
 0.873
SDH02171.1
Signal transduction histidine kinase.
 0.864
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.