STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH56635.1Hypothetical protein. (321 aa)    
Predicted Functional Partners:
SDH56681.1
Hypothetical protein.
       0.661
SDH09577.1
Hypothetical protein.
  
     0.622
SDG22738.1
Hypothetical protein.
  
     0.564
recD2
Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
 
    0.549
SDI53355.1
Helix-turn-helix of DDE superfamily endonuclease.
  
     0.546
SDG23475.1
Hypothetical protein.
  
     0.545
SDI59524.1
Pretoxin HINT domain-containing protein.
  
     0.528
SDH56603.1
protein-L-isoaspartate(D-aspartate) O-methyltransferase.
 
     0.504
SDI17909.1
Polyene glycosyltransferase.
  
     0.495
SDI07656.1
Hypothetical protein.
  
     0.493
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.