STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH58486.1ABC-type transport system, involved in lipoprotein release, permease component. (775 aa)    
Predicted Functional Partners:
SDH58448.1
Putative ABC transport system ATP-binding protein.
 
  0.957
SDI10938.1
Putative ABC transport system ATP-binding protein.
  
  0.791
SDH21846.1
Putative ABC transport system permease protein/macrolide transport system ATP-binding/permease protein.
 
 
 0.765
SDH21873.1
Putative ABC transport system ATP-binding protein.
  
  0.765
SDG55737.1
Putative ABC transport system ATP-binding protein.
  
  0.730
SDI10970.1
Putative ABC transport system permease protein.
 
 
 0.725
SDH02287.1
Putative ABC transport system ATP-binding protein.
  
  0.706
SDH56860.1
ABC transporter.
  
  0.688
SDI56675.1
Putative ABC transport system ATP-binding protein.
  
  0.684
SDI10887.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.681
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.