STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH61917.1Protein of unknown function. (244 aa)    
Predicted Functional Partners:
SDI08115.1
2,3-dihydroxybenzoate-AMP ligase.
   
    0.801
SDH20738.1
Sulfotransferase family protein.
  
     0.762
SDG62729.1
Hypothetical protein.
  
     0.734
SDG20859.1
Helicase conserved C-terminal domain-containing protein.
  
     0.725
SDG66838.1
Putative Flp pilus-assembly TadE/G-like.
  
     0.708
rpsD-2
Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
 
     0.706
SDH39107.1
Membrane protein DedA, SNARE-associated domain.
  
     0.698
SDH63274.1
Hypothetical protein.
  
     0.688
SDG66353.1
ABC-2 type transport system permease protein.
  
     0.667
SDH81087.1
DNA-binding transcriptional activator of the SARP family.
  
     0.664
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.