STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH68417.1DNA-binding transcriptional regulator, XRE-family HTH domain. (392 aa)    
Predicted Functional Partners:
SDG63480.1
Hypothetical protein.
  
     0.746
SDF99623.1
Hypothetical protein.
  
     0.598
SDG28369.1
Helix-turn-helix.
  
     0.589
SDH68466.1
S-adenosyl methyltransferase.
 
     0.568
SDG05297.1
Thiopeptide-type bacteriocin biosynthesis domain-containing protein.
  
     0.545
SDG20938.1
Protein of unknown function.
  
     0.545
SDH02028.1
CRISPR system Cascade subunit CasB.
  
     0.526
SDH91613.1
Erythromycin esterase homolog.
  
     0.518
SDG66534.1
Hypothetical protein.
  
     0.501
SDH27841.1
Ferric iron reductase protein FhuF, involved in iron transport.
  
     0.501
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.