STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH74239.1Alcohol dehydrogenase. (346 aa)    
Predicted Functional Partners:
SDI47357.1
Acyl transferase domain-containing protein.
  
 
 0.794
SDH74207.1
BON domain-containing protein.
       0.773
SDH35881.1
Zn-dependent alcohol dehydrogenase.
 
 
0.766
SDH02936.1
Alcohol dehydrogenase, propanol-preferring.
 
 
0.761
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
  
 
 0.754
SDG45625.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.741
SDG17137.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 
 0.740
SDG46897.1
Dimethylglycine dehydrogenase/4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
  
 
 0.740
SDI45158.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE/hypothetical protein.
  
 
 0.726
SDG05878.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.700
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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