STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH85087.1Inner membrane component of T3SS domain-containing protein. (154 aa)    
Predicted Functional Partners:
SDH85123.1
FHA domain-containing protein.
   
 0.992
SDH84950.1
Serine/threonine protein kinase.
 
 
 
 0.990
SDI02720.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.988
SDG83834.1
Serine/threonine protein kinase.
 
 
 
 0.979
SDI03532.1
Serine/threonine protein kinase.
 
 
 
 0.967
SDH85059.1
Protein phosphatase.
 
  
 0.942
SDH85027.1
Cell division protein FtsW, lipid II flippase; Belongs to the SEDS family.
 
   
 0.930
SDH84995.1
Peptidoglycan glycosyltransferase.
 
   
 0.929
SDH84970.1
Serine/threonine protein kinase.
 
 
 
 0.912
SDI26491.1
PAS domain S-box-containing protein.
  
 
 0.846
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.