STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH97829.1Radical SAM superfamily enzyme with C-terminal helix-hairpin-helix motif. (514 aa)    
Predicted Functional Partners:
SDH97739.1
Sugar or nucleoside kinase, ribokinase family.
 
     0.951
SDH97798.1
Maleate isomerase.
 
     0.945
SDH97769.1
Hypothetical protein.
       0.793
SDH97664.1
Hypothetical protein.
       0.737
SDH97698.1
Nucleoside 2-deoxyribosyltransferase.
       0.737
SDI59259.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
  
     0.725
SDG62708.1
TIGR03083 family protein.
  
     0.579
SDH69255.1
AAA domain-containing protein.
  
     0.545
SDH97858.1
Hypothetical protein.
       0.533
SDH62965.1
Fic family protein.
  
     0.494
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.