STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI06281.1Hypothetical protein. (505 aa)    
Predicted Functional Partners:
SDI06387.1
Hydrogenase large subunit.
 
 0.983
SDI06257.1
Hydrogenase maturation protease.
     0.978
SDI06310.1
Hypothetical protein.
 
     0.960
SDI06334.1
Hypothetical protein.
 
     0.960
SDI06360.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
 
     0.957
SDI06415.1
Hydrogenase small subunit.
 
  
 0.957
hypA
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.868
SDI06440.1
D-sedoheptulose 7-phosphate isomerase.
 
   
 0.773
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
   0.767
SDI06178.1
Hydrogenase expression/formation protein HypC.
 
  
 0.765
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.