STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI16297.1Hypothetical protein. (141 aa)    
Predicted Functional Partners:
SDI16314.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
 
    0.932
SDI16271.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.848
SDG00012.1
Phosphotransferase enzyme family protein.
  
     0.614
SDG22738.1
Hypothetical protein.
  
     0.611
SDH27222.1
Helix-turn-helix domain-containing protein.
  
     0.574
SDG02527.1
N-6 DNA Methylase.
  
     0.538
SDG75258.1
Thiopeptide-type bacteriocin biosynthesis domain-containing protein.
  
     0.530
SDG75285.1
Lanthionine synthetase C-like protein.
  
     0.528
SDH10269.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
    
  0.503
SDI07678.1
Iron-sulfur cluster-binding domain-containing protein.
  
     0.493
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.