STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI20385.1DNA-binding transcriptional regulator, GntR family. (233 aa)    
Predicted Functional Partners:
SDI27777.1
Regulatory protein, gntR family.
  
     0.673
SDI54958.1
GntR family transcriptional regulator.
  
     0.671
SDI55019.1
GntR family transcriptional regulator.
  
     0.669
SDH42264.1
Regulatory protein, gntR family.
  
     0.662
SDH93059.1
GntR family transcriptional regulator.
  
     0.662
SDI03434.1
GntR family transcriptional regulator.
  
     0.652
SDG15250.1
GntR family transcriptional regulator.
  
     0.640
SDI05177.1
Regulatory protein, gntR family.
  
     0.630
SDH01441.1
Regulatory protein, gntR family.
  
     0.627
SDI37017.1
Regulatory protein, gntR family.
  
     0.616
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.