Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG35010.1 | SDH02496.1 | SAMN05421505_103290 | SAMN05421505_110149 | Acetoacetate decarboxylase (ADC). | DNA-binding transcriptional regulator, PucR family. | 0.741 |
SDG35010.1 | SDH21895.1 | SAMN05421505_103290 | SAMN05421505_112219 | Acetoacetate decarboxylase (ADC). | Putative peptidoglycan binding domain-containing protein. | 0.771 |
SDG35010.1 | SDI24400.1 | SAMN05421505_103290 | SAMN05421505_14023 | Acetoacetate decarboxylase (ADC). | Hypothetical protein. | 0.660 |
SDG35010.1 | SDI35047.1 | SAMN05421505_103290 | SAMN05421505_14540 | Acetoacetate decarboxylase (ADC). | Microbial collagenase. | 0.705 |
SDH00628.1 | SDH00690.1 | SAMN05421505_11085 | SAMN05421505_11087 | Hypothetical protein. | Type VII secretion protein EccB. | 0.881 |
SDH00628.1 | SDH00946.1 | SAMN05421505_11085 | SAMN05421505_11096 | Hypothetical protein. | Type VII secretion integral membrane protein EccD. | 0.781 |
SDH00628.1 | SDI24400.1 | SAMN05421505_11085 | SAMN05421505_14023 | Hypothetical protein. | Hypothetical protein. | 0.723 |
SDH00690.1 | SDH00628.1 | SAMN05421505_11087 | SAMN05421505_11085 | Type VII secretion protein EccB. | Hypothetical protein. | 0.881 |
SDH00690.1 | SDH00946.1 | SAMN05421505_11087 | SAMN05421505_11096 | Type VII secretion protein EccB. | Type VII secretion integral membrane protein EccD. | 0.903 |
SDH00690.1 | SDH21895.1 | SAMN05421505_11087 | SAMN05421505_112219 | Type VII secretion protein EccB. | Putative peptidoglycan binding domain-containing protein. | 0.429 |
SDH00690.1 | SDI24400.1 | SAMN05421505_11087 | SAMN05421505_14023 | Type VII secretion protein EccB. | Hypothetical protein. | 0.695 |
SDH00946.1 | SDH00628.1 | SAMN05421505_11096 | SAMN05421505_11085 | Type VII secretion integral membrane protein EccD. | Hypothetical protein. | 0.781 |
SDH00946.1 | SDH00690.1 | SAMN05421505_11096 | SAMN05421505_11087 | Type VII secretion integral membrane protein EccD. | Type VII secretion protein EccB. | 0.903 |
SDH00946.1 | SDH21895.1 | SAMN05421505_11096 | SAMN05421505_112219 | Type VII secretion integral membrane protein EccD. | Putative peptidoglycan binding domain-containing protein. | 0.431 |
SDH00946.1 | SDI24400.1 | SAMN05421505_11096 | SAMN05421505_14023 | Type VII secretion integral membrane protein EccD. | Hypothetical protein. | 0.723 |
SDH02496.1 | SDG35010.1 | SAMN05421505_110149 | SAMN05421505_103290 | DNA-binding transcriptional regulator, PucR family. | Acetoacetate decarboxylase (ADC). | 0.741 |
SDH02496.1 | SDH21895.1 | SAMN05421505_110149 | SAMN05421505_112219 | DNA-binding transcriptional regulator, PucR family. | Putative peptidoglycan binding domain-containing protein. | 0.746 |
SDH02496.1 | SDI24400.1 | SAMN05421505_110149 | SAMN05421505_14023 | DNA-binding transcriptional regulator, PucR family. | Hypothetical protein. | 0.733 |
SDH02496.1 | SDI35047.1 | SAMN05421505_110149 | SAMN05421505_14540 | DNA-binding transcriptional regulator, PucR family. | Microbial collagenase. | 0.458 |
SDH21895.1 | SDG35010.1 | SAMN05421505_112219 | SAMN05421505_103290 | Putative peptidoglycan binding domain-containing protein. | Acetoacetate decarboxylase (ADC). | 0.771 |
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