STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI24400.1Hypothetical protein. (1346 aa)    
Predicted Functional Partners:
SDI24346.1
Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
       0.773
SDI24373.1
Hypothetical protein.
       0.773
SDI24428.1
Hypothetical protein.
       0.773
SDH02496.1
DNA-binding transcriptional regulator, PucR family.
  
     0.733
SDH00628.1
Hypothetical protein.
  
     0.723
SDH00946.1
Type VII secretion integral membrane protein EccD.
  
     0.723
SDH21895.1
Putative peptidoglycan binding domain-containing protein.
  
     0.721
SDI35047.1
Microbial collagenase.
  
     0.697
SDH00690.1
Type VII secretion protein EccB.
  
     0.695
SDG35010.1
Acetoacetate decarboxylase (ADC).
  
     0.660
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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