Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG18785.1 | SDI27777.1 | SAMN05421505_102192 | SAMN05421505_1424 | Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | Regulatory protein, gntR family. | 0.486 |
SDI20385.1 | SDI27777.1 | SAMN05421505_13819 | SAMN05421505_1424 | DNA-binding transcriptional regulator, GntR family. | Regulatory protein, gntR family. | 0.673 |
SDI20385.1 | SDI44192.1 | SAMN05421505_13819 | SAMN05421505_15212 | DNA-binding transcriptional regulator, GntR family. | AraC-type DNA-binding protein. | 0.412 |
SDI27750.1 | SDI27777.1 | SAMN05421505_1423 | SAMN05421505_1424 | HD domain-containing protein. | Regulatory protein, gntR family. | 0.775 |
SDI27750.1 | SDI27800.1 | SAMN05421505_1423 | SAMN05421505_1425 | HD domain-containing protein. | Zn-dependent peptidase ImmA, M78 family. | 0.440 |
SDI27750.1 | SDI27825.1 | SAMN05421505_1423 | SAMN05421505_1426 | HD domain-containing protein. | Hypothetical protein. | 0.440 |
SDI27777.1 | SDG18785.1 | SAMN05421505_1424 | SAMN05421505_102192 | Regulatory protein, gntR family. | Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.486 |
SDI27777.1 | SDI20385.1 | SAMN05421505_1424 | SAMN05421505_13819 | Regulatory protein, gntR family. | DNA-binding transcriptional regulator, GntR family. | 0.673 |
SDI27777.1 | SDI27750.1 | SAMN05421505_1424 | SAMN05421505_1423 | Regulatory protein, gntR family. | HD domain-containing protein. | 0.775 |
SDI27777.1 | SDI27800.1 | SAMN05421505_1424 | SAMN05421505_1425 | Regulatory protein, gntR family. | Zn-dependent peptidase ImmA, M78 family. | 0.558 |
SDI27777.1 | SDI27825.1 | SAMN05421505_1424 | SAMN05421505_1426 | Regulatory protein, gntR family. | Hypothetical protein. | 0.440 |
SDI27777.1 | SDI44192.1 | SAMN05421505_1424 | SAMN05421505_15212 | Regulatory protein, gntR family. | AraC-type DNA-binding protein. | 0.412 |
SDI27800.1 | SDI27750.1 | SAMN05421505_1425 | SAMN05421505_1423 | Zn-dependent peptidase ImmA, M78 family. | HD domain-containing protein. | 0.440 |
SDI27800.1 | SDI27777.1 | SAMN05421505_1425 | SAMN05421505_1424 | Zn-dependent peptidase ImmA, M78 family. | Regulatory protein, gntR family. | 0.558 |
SDI27800.1 | SDI27825.1 | SAMN05421505_1425 | SAMN05421505_1426 | Zn-dependent peptidase ImmA, M78 family. | Hypothetical protein. | 0.831 |
SDI27825.1 | SDI27750.1 | SAMN05421505_1426 | SAMN05421505_1423 | Hypothetical protein. | HD domain-containing protein. | 0.440 |
SDI27825.1 | SDI27777.1 | SAMN05421505_1426 | SAMN05421505_1424 | Hypothetical protein. | Regulatory protein, gntR family. | 0.440 |
SDI27825.1 | SDI27800.1 | SAMN05421505_1426 | SAMN05421505_1425 | Hypothetical protein. | Zn-dependent peptidase ImmA, M78 family. | 0.831 |
SDI44192.1 | SDI20385.1 | SAMN05421505_15212 | SAMN05421505_13819 | AraC-type DNA-binding protein. | DNA-binding transcriptional regulator, GntR family. | 0.412 |
SDI44192.1 | SDI27777.1 | SAMN05421505_15212 | SAMN05421505_1424 | AraC-type DNA-binding protein. | Regulatory protein, gntR family. | 0.412 |