STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI40825.1Phage portal protein, SPP1 Gp6-like. (466 aa)    
Predicted Functional Partners:
SDI40798.1
Phage Terminase.
       0.790
SDI40772.1
Hypothetical protein.
       0.787
SDI40858.1
Hypothetical protein.
       0.776
SDH19574.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
 
     0.718
SDI40965.1
Phage major capsid protein E.
 
     0.643
SDI40912.1
Protein of unknown function.
       0.631
SDI40939.1
Hypothetical protein.
       0.608
SDI40884.1
Hypothetical protein.
       0.594
SDI41019.1
Phage protein Gp19/Gp15/Gp42.
       0.536
SDG29762.1
D-alanyl-D-alanine carboxypeptidase.
  
     0.525
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.