STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI41653.1Hypothetical protein. (342 aa)    
Predicted Functional Partners:
SDI41679.1
Phenylacetic acid degradation operon negative regulatory protein.
 
     0.909
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
  0.674
SDF99713.1
Radical SAM superfamily enzyme YgiQ, UPF0313 family.
  
     0.627
SDG63915.1
PTS system, N-acetylglucosamine-specific IIA component.
    
   0.509
SDG68113.1
Hypothetical protein.
  
     0.456
SDG41283.1
Lantibiotic dehydratase, C terminus.
  
     0.436
SDI13122.1
Saccharopine dehydrogenase, NADP-dependent.
 
     0.432
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.