STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI46925.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
SDI46904.1
Hypothetical protein.
       0.754
SDG18010.1
Competence protein ComEC.
  
  
 0.693
SDG64181.1
Predicted amidophosphoribosyltransferases.
  
 
 0.608
SDG07157.1
Leader peptidase (prepilin peptidase) / N-methyltransferase.
  
  
 0.575
SDI46955.1
Hypothetical protein.
       0.556
SDI26491.1
PAS domain S-box-containing protein.
  
    0.513
SDI46979.1
Hypothetical protein.
       0.511
SDI47007.1
Hypothetical protein.
       0.511
SDI47030.1
Phosphotransferase enzyme family protein.
       0.511
SDI47051.1
L-lactate dehydrogenase.
       0.511
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.