STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI05580.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
AEI05674.1
Hypothetical protein.
  
     0.760
AEI05530.1
Hypothetical protein.
  
     0.746
AEI06980.1
Hypothetical protein.
  
     0.743
AEI05635.1
Hypothetical protein.
  
     0.729
AEI07924.1
Hypothetical protein.
  
     0.716
AEI06865.1
Hypothetical protein.
  
     0.715
AEI07960.1
Hypothetical protein.
  
     0.711
pdhS
Cell division control histidine kinase PdhS.
  
     0.694
AEI06526.1
Hypothetical protein.
  
     0.681
AEI06150.1
Hypothetical protein.
  
     0.668
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.