STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI05601.1TonB dependent receptor protein. (726 aa)    
Predicted Functional Partners:
AEI06066.1
TonB like protein.
 
 
 0.817
AEI07742.1
TonB like protein.
 
 
 0.766
AEI07067.1
TonB-dependent receptor protein.
  
 
 0.725
tolA
Translocation protein TolA.
  
 
 0.639
AEI06932.1
Hypothetical protein.
  
 
 0.639
AEI05278.1
ABC transporter substrate-binding protein.
 
    0.577
AEI08055.1
TonB-dependent siderophore receptor.
  
  
 0.562
lspA
Lipoprotein signal peptidase LspA; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.555
AEI06062.1
TonB-dependent siderophore receptor.
  
  
 0.549
AEI07745.1
TonB-dependent heme/hemoglobin receptor.
  
 
 0.542
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.