STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI05723.1ABC transporter permease protein. (279 aa)    
Predicted Functional Partners:
AEI05722.1
ABC transporter ATP-binding protein.
 
  0.969
AEI05724.1
ABC transporter substrate-binding protein.
 
 
  0.909
AEI05480.1
ABC transporter ATP-binding protein.
 
  0.865
AEI05187.1
ABC transporter ATP-binding protein.
 
  0.856
AEI07052.1
ABC transporter ATP-binding protein.
 
  0.849
tauB
ABC transporter, taurine import ATP-binding protein TauB.
 
  0.848
AEI05111.1
ABC transporter, aliphatic sulfonates import ATP-binding protein.
 
  0.846
AEI05919.1
ABC transporter ATP-binding protein protein, putative sufonate binding protein.
 
  0.839
AEI05109.1
ABC transporter, putative aliphatic sulfonates-binding protein.
 
 
  0.816
AEI05479.1
ABC transporter substrate-binding protein.
 
 
  0.814
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.