STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI05735.1GGDEF domain protein. (397 aa)    
Predicted Functional Partners:
AEI06055.1
GGDEF/EAL domain protein.
0.802
AEI08070.1
Putative histidine kinase/response regulator.
 0.791
dhkJ
Hybrid signal transduction histidine kinase J.
 0.788
AEI05640.1
Putative response regulator protein.
 
 
 0.786
AEI05728.1
Sensor histidine kinase.
 
 
 0.767
AEI05963.1
Putative ABC transporter permease.
 
 
  0.767
AEI07272.1
Putative histidine kinase/response regulator.
  
 0.756
AEI07546.1
GGDEF/EAL domain protein.
0.736
AEI05911.1
GGDEF/EAL domain protein.
 
0.734
AEI05515.1
Diguanylate cyclase/phosphodiesterase.
0.733
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.