Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gsiA2Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. (539 aa)    
Predicted Functional Partners:
AEI06660.1
ABC transporter permease protein.
 
 0.984
AEI06661.1
ABC transporter permease protein.
 
 
 0.973
dppC2
Peptide transport system permease DppC.
 
 0.969
gsiD
Glutathione transport system permease GsiD.
 
 0.966
dppC1
ABC transporter dipeptide permease DppC.
 
 0.953
gsiC
Glutathione transport system permease GsiC.
 
 
 0.890
AEI04830.1
ABC transporter permease protein.
 
 
 0.887
dppB
Dipeptide transport system permease DppB.
 
 
 0.884
AEI06662.1
Bacterial extracellular solute-binding protein.
 
 
 0.773
yejE
ABC transporter inner membrane permease protein YejE.
 
     0.721
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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