STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI06670.1Putative 3-hydroxybutyryl-CoA dehydratase. (249 aa)    
Predicted Functional Partners:
hbdA
3-hydroxybutyryl-CoA dehydrogenase HbdA.
 0.985
dhkJ
Hybrid signal transduction histidine kinase J.
    
 0.968
AEI07272.1
Putative histidine kinase/response regulator.
    
 0.968
AEI08070.1
Putative histidine kinase/response regulator.
    
 0.968
AEI07922.1
Na-dependent permease, histidine kinase.
   
 0.953
AEI06668.1
acyl-CoA dehydrogenase.
 
  0.928
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
    
 0.882
rpmG
50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.877
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.876
rpsP
30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.875
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.