Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEI06675.1Efflux transporter, outer membrane factor lipoprotein, NodT family. (512 aa)    
Predicted Functional Partners:
acrE
Acriflavine resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.958
acrB2
Acriflavine resistance protein AcrB.
 
 0.956
mdtA2
Multidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.955
AEI06654.1
Outer membrane protein, TolC family protein.
  
  
 0.922
tolC
Outer membrane efflux protein TolC.
  
  
 0.919
AEI06429.1
Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.883
mdtC2
Multidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.871
mdtB2
Multidrug resistance protein MdtB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.871
AEI05974.1
Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.847
AEI05973.1
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
 0.843
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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