STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI06834.1Hypothetical protein. (395 aa)    
Predicted Functional Partners:
AEI06835.1
Putative lipopolysaccharide biosynthesis.
 
   
 0.790
AEI07037.1
Putative transmembran protein.
 
     0.785
AEI07712.1
Hypothetical protein.
 
     0.774
cpaD
Flp pilus assembly protein CpaD.
  
     0.757
AEI07323.1
Hypothetical protein.
  
     0.756
AEI07981.1
Hypothetical protein.
 
     0.756
AEI07087.1
Hypothetical protein.
  
     0.753
AEI07159.1
Hypothetical protein.
  
     0.745
AEI07255.1
Hypothetical protein.
  
     0.743
AEI06158.1
Hypothetical protein.
  
     0.741
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.