STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI07104.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
AEI07107.1
Putative phage tail protein I.
  
  
 0.969
AEI07108.1
Putative baseplate assembly protein J.
  
  
 0.967
AEI07109.1
Putative baseplate assembly protein W.
  
  
 0.961
AEI07110.1
Putative baseplate assembly protein V.
  
  
 0.957
AEI07098.1
Putative phage tail assembly protein.
  
  
 0.913
AEI07096.1
Putative phage late control protein D.
  
  
 0.901
AEI07097.1
Putative phage tail protein.
  
    0.900
fII
Putative phage tail tube protein FII.
  
  
 0.885
AEI07102.1
Putative phage tail sheath protein FI.
  
  
 0.860
AEI07103.1
Hypothetical protein.
       0.768
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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