STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI07470.1Hypothetical protein. (365 aa)    
Predicted Functional Partners:
AEI07478.1
Hypothetical protein.
 
     0.775
AEI07480.1
Putative cytochrome c.
 
  
 0.771
soxB
5'-nucleotidase, putative sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
 
     0.761
sox
Sulfite oxidase Sox.
 
   
 0.726
soxZ1
Sulfur oxidation protein SoxZ.
 
     0.709
soxZ2
Sulfur oxidation protein SoxZ.
 
     0.672
AEI07476.1
Putative sulfur oxidation protein SoxA.
 
  
 0.658
cysN
Sulfate adenylyltransferase, large subunit CysN; Catalyzes the synthesis of activated sulfate.
   
    0.634
AEI07483.1
Metallo-beta-lactamase family protein.
 
     0.582
AEI07472.1
Hypothetical protein.
 
   
 0.562
Your Current Organism:
Oligotropha carboxidovorans
NCBI taxonomy Id: 504832
Other names: O. carboxidovorans OM5, Oligotropha carboxidovorans OM5, Oligotropha carboxidovorans str. OM5, Oligotropha carboxidovorans strain OM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.