Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEI07612.1 | AEI07624.1 | OCA5_c29210 | OCA5_c29330 | Peptidase U32. | NosL family protein. | 0.588 |
AEI07612.1 | nosD | OCA5_c29210 | OCA5_c29300 | Peptidase U32. | Copper-binding periplasmic protein NosD. | 0.575 |
AEI07612.1 | nosF | OCA5_c29210 | OCA5_c29310 | Peptidase U32. | Copper transport ATP-binding protein NosF. | 0.406 |
AEI07612.1 | nosR | OCA5_c29210 | OCA5_c29280 | Peptidase U32. | Regulatory protein NosR. | 0.654 |
AEI07612.1 | nosY | OCA5_c29210 | OCA5_c29320 | Peptidase U32. | Membrane protein NosY. | 0.511 |
AEI07612.1 | nosZ | OCA5_c29210 | OCA5_c29290 | Peptidase U32. | Nitrous-oxide reductase NosZ; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family. | 0.532 |
AEI07618.1 | AEI07624.1 | OCA5_c29270 | OCA5_c29330 | Hypothetical protein. | NosL family protein. | 0.561 |
AEI07618.1 | AEI07625.1 | OCA5_c29270 | OCA5_c29340 | Hypothetical protein. | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.509 |
AEI07618.1 | nosD | OCA5_c29270 | OCA5_c29300 | Hypothetical protein. | Copper-binding periplasmic protein NosD. | 0.561 |
AEI07618.1 | nosF | OCA5_c29270 | OCA5_c29310 | Hypothetical protein. | Copper transport ATP-binding protein NosF. | 0.501 |
AEI07618.1 | nosR | OCA5_c29270 | OCA5_c29280 | Hypothetical protein. | Regulatory protein NosR. | 0.623 |
AEI07618.1 | nosY | OCA5_c29270 | OCA5_c29320 | Hypothetical protein. | Membrane protein NosY. | 0.559 |
AEI07618.1 | nosZ | OCA5_c29270 | OCA5_c29290 | Hypothetical protein. | Nitrous-oxide reductase NosZ; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family. | 0.573 |
AEI07624.1 | AEI07612.1 | OCA5_c29330 | OCA5_c29210 | NosL family protein. | Peptidase U32. | 0.588 |
AEI07624.1 | AEI07618.1 | OCA5_c29330 | OCA5_c29270 | NosL family protein. | Hypothetical protein. | 0.561 |
AEI07624.1 | AEI07625.1 | OCA5_c29330 | OCA5_c29340 | NosL family protein. | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.932 |
AEI07624.1 | cycA | OCA5_c29330 | OCA5_c29350 | NosL family protein. | Cytochrome c2. | 0.534 |
AEI07624.1 | nosD | OCA5_c29330 | OCA5_c29300 | NosL family protein. | Copper-binding periplasmic protein NosD. | 0.998 |
AEI07624.1 | nosF | OCA5_c29330 | OCA5_c29310 | NosL family protein. | Copper transport ATP-binding protein NosF. | 0.974 |
AEI07624.1 | nosR | OCA5_c29330 | OCA5_c29280 | NosL family protein. | Regulatory protein NosR. | 0.972 |
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