STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB24752.1PAS domain-containing protein. (670 aa)    
Predicted Functional Partners:
SKB28056.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 
 0.977
SKB58040.1
Tubulin-specific chaperone A.
 
 
 0.961
SKB28132.1
Signal transduction histidine kinase.
 
 
 0.896
SKB24750.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 
   0.822
SKB28139.1
ABC-type amino acid transport substrate-binding protein.
  
 
 0.765
SKB74716.1
PAS domain S-box-containing protein.
 
 
 0.758
SKB35187.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
 0.754
SKB62128.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 
0.686
SKB81507.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.660
SKB76839.1
PAS domain S-box-containing protein.
 
 
 0.654
Your Current Organism:
Arcobacter marinus
NCBI taxonomy Id: 505249
Other names: Arcobacter marinus Kim et al. 2010, Arcobacter sp. CECT 7727, Arcobacter sp. CL-S1, JCM 15502, KCCM 90072, Malacobacter marinus, strain CL-S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.