Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DinP | RodA | SAMN06295997_104143 | SAMN06295997_103108 | DNA polymerase-4. | Rod shape determining protein RodA; Belongs to the SEDS family. | 0.829 |
FtsI | MrdA | SAMN06295997_1014 | SAMN06295997_1086 | Cell division protein FtsI (penicillin-binding protein 3). | Peptidoglycan glycosyltransferase. | 0.949 |
FtsI | MurC | SAMN06295997_1014 | SAMN06295997_10741 | Cell division protein FtsI (penicillin-binding protein 3). | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.875 |
FtsI | PbpA | SAMN06295997_1014 | SAMN06295997_10114 | Cell division protein FtsI (penicillin-binding protein 3). | Penicillin-binding protein 1A. | 0.900 |
FtsI | RodA | SAMN06295997_1014 | SAMN06295997_103108 | Cell division protein FtsI (penicillin-binding protein 3). | Rod shape determining protein RodA; Belongs to the SEDS family. | 0.962 |
FtsI | SKB24704.1 | SAMN06295997_1014 | SAMN06295997_10119 | Cell division protein FtsI (penicillin-binding protein 3). | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | 0.891 |
FtsI | mraY | SAMN06295997_1014 | SAMN06295997_10118 | Cell division protein FtsI (penicillin-binding protein 3). | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.634 |
FtsI | mrdB | SAMN06295997_1014 | SAMN06295997_10661 | Cell division protein FtsI (penicillin-binding protein 3). | Rod shape-determining protein MreB. | 0.549 |
FtsI | murA | SAMN06295997_1014 | SAMN06295997_14013 | Cell division protein FtsI (penicillin-binding protein 3). | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.733 |
FtsI | murG | SAMN06295997_1014 | SAMN06295997_1016 | Cell division protein FtsI (penicillin-binding protein 3). | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.902 |
MrdA | FtsI | SAMN06295997_1086 | SAMN06295997_1014 | Peptidoglycan glycosyltransferase. | Cell division protein FtsI (penicillin-binding protein 3). | 0.949 |
MrdA | MurC | SAMN06295997_1086 | SAMN06295997_10741 | Peptidoglycan glycosyltransferase. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.494 |
MrdA | PbpA | SAMN06295997_1086 | SAMN06295997_10114 | Peptidoglycan glycosyltransferase. | Penicillin-binding protein 1A. | 0.796 |
MrdA | RodA | SAMN06295997_1086 | SAMN06295997_103108 | Peptidoglycan glycosyltransferase. | Rod shape determining protein RodA; Belongs to the SEDS family. | 0.989 |
MrdA | SKB24704.1 | SAMN06295997_1086 | SAMN06295997_10119 | Peptidoglycan glycosyltransferase. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Belongs to the MurCDEF family. | 0.414 |
MrdA | mraY | SAMN06295997_1086 | SAMN06295997_10118 | Peptidoglycan glycosyltransferase. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.427 |
MrdA | mrdB | SAMN06295997_1086 | SAMN06295997_10661 | Peptidoglycan glycosyltransferase. | Rod shape-determining protein MreB. | 0.872 |
MrdA | murA | SAMN06295997_1086 | SAMN06295997_14013 | Peptidoglycan glycosyltransferase. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.472 |
MrdA | murG | SAMN06295997_1086 | SAMN06295997_1016 | Peptidoglycan glycosyltransferase. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.494 |
MurC | FtsI | SAMN06295997_10741 | SAMN06295997_1014 | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | Cell division protein FtsI (penicillin-binding protein 3). | 0.875 |
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