Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ArsP | SKB27704.1 | SAMN06295997_10785 | SAMN06295997_10315 | Hypothetical protein. | Methyltransferase small domain-containing protein. | 0.489 |
SKB27686.1 | SKB27704.1 | SAMN06295997_10314 | SAMN06295997_10315 | EF hand. | Methyltransferase small domain-containing protein. | 0.588 |
SKB27686.1 | SKB27714.1 | SAMN06295997_10314 | SAMN06295997_10316 | EF hand. | CoA-substrate-specific enzyme activase, putative. | 0.499 |
SKB27686.1 | SKB27723.1 | SAMN06295997_10314 | SAMN06295997_10317 | EF hand. | Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB. | 0.499 |
SKB27704.1 | ArsP | SAMN06295997_10315 | SAMN06295997_10785 | Methyltransferase small domain-containing protein. | Hypothetical protein. | 0.489 |
SKB27704.1 | SKB27686.1 | SAMN06295997_10315 | SAMN06295997_10314 | Methyltransferase small domain-containing protein. | EF hand. | 0.588 |
SKB27704.1 | SKB27714.1 | SAMN06295997_10315 | SAMN06295997_10316 | Methyltransferase small domain-containing protein. | CoA-substrate-specific enzyme activase, putative. | 0.648 |
SKB27704.1 | SKB27723.1 | SAMN06295997_10315 | SAMN06295997_10317 | Methyltransferase small domain-containing protein. | Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB. | 0.648 |
SKB27704.1 | SKB74371.1 | SAMN06295997_10315 | SAMN06295997_1381 | Methyltransferase small domain-containing protein. | Hypothetical protein. | 0.466 |
SKB27704.1 | rpoC | SAMN06295997_10315 | SAMN06295997_10134 | Methyltransferase small domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.445 |
SKB27704.1 | truA | SAMN06295997_10315 | SAMN06295997_13111 | Methyltransferase small domain-containing protein. | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.444 |
SKB27704.1 | truB | SAMN06295997_10315 | SAMN06295997_13330 | Methyltransferase small domain-containing protein. | tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.726 |
SKB27704.1 | truD | SAMN06295997_10315 | SAMN06295997_102111 | Methyltransferase small domain-containing protein. | tRNA pseudouridine13 synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.453 |
SKB27704.1 | truD-2 | SAMN06295997_10315 | SAMN06295997_12644 | Methyltransferase small domain-containing protein. | tRNA pseudouridine13 synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.453 |
SKB27714.1 | SKB27686.1 | SAMN06295997_10316 | SAMN06295997_10314 | CoA-substrate-specific enzyme activase, putative. | EF hand. | 0.499 |
SKB27714.1 | SKB27704.1 | SAMN06295997_10316 | SAMN06295997_10315 | CoA-substrate-specific enzyme activase, putative. | Methyltransferase small domain-containing protein. | 0.648 |
SKB27714.1 | SKB27723.1 | SAMN06295997_10316 | SAMN06295997_10317 | CoA-substrate-specific enzyme activase, putative. | Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB. | 0.995 |
SKB27723.1 | SKB27686.1 | SAMN06295997_10317 | SAMN06295997_10314 | Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB. | EF hand. | 0.499 |
SKB27723.1 | SKB27704.1 | SAMN06295997_10317 | SAMN06295997_10315 | Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB. | Methyltransferase small domain-containing protein. | 0.648 |
SKB27723.1 | SKB27714.1 | SAMN06295997_10317 | SAMN06295997_10316 | Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB. | CoA-substrate-specific enzyme activase, putative. | 0.995 |
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