Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AspB | SKB32614.1 | SAMN06295997_10590 | SAMN06295997_10588 | Aspartate aminotransferase. | Methyl-accepting chemotaxis protein. | 0.482 |
AspB | SKB32623.1 | SAMN06295997_10590 | SAMN06295997_10589 | Aspartate aminotransferase. | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.779 |
AspB | SKB32647.1 | SAMN06295997_10590 | SAMN06295997_10591 | Aspartate aminotransferase. | Hypothetical protein. | 0.548 |
AspB | mdh | SAMN06295997_10590 | SAMN06295997_10579 | Aspartate aminotransferase. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.927 |
SKB32614.1 | AspB | SAMN06295997_10588 | SAMN06295997_10590 | Methyl-accepting chemotaxis protein. | Aspartate aminotransferase. | 0.482 |
SKB32614.1 | SKB32623.1 | SAMN06295997_10588 | SAMN06295997_10589 | Methyl-accepting chemotaxis protein. | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.482 |
SKB32623.1 | AspB | SAMN06295997_10589 | SAMN06295997_10590 | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Aspartate aminotransferase. | 0.779 |
SKB32623.1 | SKB32614.1 | SAMN06295997_10589 | SAMN06295997_10588 | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Methyl-accepting chemotaxis protein. | 0.482 |
SKB32623.1 | SKB32647.1 | SAMN06295997_10589 | SAMN06295997_10591 | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Hypothetical protein. | 0.547 |
SKB32623.1 | SKB78409.1 | SAMN06295997_10589 | SAMN06295997_14316 | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Cd2+/Zn2+-exporting ATPase. | 0.521 |
SKB32623.1 | mdh | SAMN06295997_10589 | SAMN06295997_10579 | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.746 |
SKB32647.1 | AspB | SAMN06295997_10591 | SAMN06295997_10590 | Hypothetical protein. | Aspartate aminotransferase. | 0.548 |
SKB32647.1 | SKB32623.1 | SAMN06295997_10591 | SAMN06295997_10589 | Hypothetical protein. | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.547 |
SKB78409.1 | SKB32623.1 | SAMN06295997_14316 | SAMN06295997_10589 | Cd2+/Zn2+-exporting ATPase. | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.521 |
mdh | AspB | SAMN06295997_10579 | SAMN06295997_10590 | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | Aspartate aminotransferase. | 0.927 |
mdh | SKB32623.1 | SAMN06295997_10579 | SAMN06295997_10589 | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.746 |