STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB34495.1UDP-2,3-diacylglucosamine pyrophosphatase LpxH. (245 aa)    
Predicted Functional Partners:
SKB34498.1
NTE family protein.
       0.804
DnaE
DNA polymerase III, alpha subunit.
     
 0.744
SKB55508.1
UDP-2,3-diacylglucosamine hydrolase.
  
     0.740
umpG
5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.734
SKB34489.1
4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis.
       0.592
SKB34539.1
Hypothetical protein.
       0.583
SKB62089.1
Acyltransferase.
 
    0.415
Your Current Organism:
Arcobacter marinus
NCBI taxonomy Id: 505249
Other names: Arcobacter marinus Kim et al. 2010, Arcobacter sp. CECT 7727, Arcobacter sp. CL-S1, JCM 15502, KCCM 90072, Malacobacter marinus, strain CL-S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.