Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RmuC | SKB41042.1 | SAMN06295997_11028 | SAMN06295997_11023 | DNA recombination protein RmuC. | Signal transduction histidine kinase. | 0.438 |
RmuC | SKB41047.1 | SAMN06295997_11028 | SAMN06295997_11024 | DNA recombination protein RmuC. | acyl-CoA thioester hydrolase. | 0.592 |
RmuC | SKB41050.1 | SAMN06295997_11028 | SAMN06295997_11025 | DNA recombination protein RmuC. | Signal transduction histidine kinase. | 0.561 |
RmuC | SKB41053.1 | SAMN06295997_11028 | SAMN06295997_11026 | DNA recombination protein RmuC. | PLD-like domain-containing protein. | 0.584 |
RmuC | SKB41057.1 | SAMN06295997_11028 | SAMN06295997_11027 | DNA recombination protein RmuC. | STE24 endopeptidase. | 0.783 |
RmuC | SKB41065.1 | SAMN06295997_11028 | SAMN06295997_11029 | DNA recombination protein RmuC. | Predicted arabinose efflux permease, MFS family. | 0.618 |
SKB41042.1 | RmuC | SAMN06295997_11023 | SAMN06295997_11028 | Signal transduction histidine kinase. | DNA recombination protein RmuC. | 0.438 |
SKB41042.1 | SKB41047.1 | SAMN06295997_11023 | SAMN06295997_11024 | Signal transduction histidine kinase. | acyl-CoA thioester hydrolase. | 0.590 |
SKB41042.1 | SKB41050.1 | SAMN06295997_11023 | SAMN06295997_11025 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.715 |
SKB41042.1 | SKB41053.1 | SAMN06295997_11023 | SAMN06295997_11026 | Signal transduction histidine kinase. | PLD-like domain-containing protein. | 0.590 |
SKB41042.1 | SKB41057.1 | SAMN06295997_11023 | SAMN06295997_11027 | Signal transduction histidine kinase. | STE24 endopeptidase. | 0.438 |
SKB41047.1 | RmuC | SAMN06295997_11024 | SAMN06295997_11028 | acyl-CoA thioester hydrolase. | DNA recombination protein RmuC. | 0.592 |
SKB41047.1 | SKB41042.1 | SAMN06295997_11024 | SAMN06295997_11023 | acyl-CoA thioester hydrolase. | Signal transduction histidine kinase. | 0.590 |
SKB41047.1 | SKB41050.1 | SAMN06295997_11024 | SAMN06295997_11025 | acyl-CoA thioester hydrolase. | Signal transduction histidine kinase. | 0.773 |
SKB41047.1 | SKB41053.1 | SAMN06295997_11024 | SAMN06295997_11026 | acyl-CoA thioester hydrolase. | PLD-like domain-containing protein. | 0.836 |
SKB41047.1 | SKB41057.1 | SAMN06295997_11024 | SAMN06295997_11027 | acyl-CoA thioester hydrolase. | STE24 endopeptidase. | 0.621 |
SKB41047.1 | SKB41065.1 | SAMN06295997_11024 | SAMN06295997_11029 | acyl-CoA thioester hydrolase. | Predicted arabinose efflux permease, MFS family. | 0.457 |
SKB41050.1 | RmuC | SAMN06295997_11025 | SAMN06295997_11028 | Signal transduction histidine kinase. | DNA recombination protein RmuC. | 0.561 |
SKB41050.1 | SKB41042.1 | SAMN06295997_11025 | SAMN06295997_11023 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.715 |
SKB41050.1 | SKB41047.1 | SAMN06295997_11025 | SAMN06295997_11024 | Signal transduction histidine kinase. | acyl-CoA thioester hydrolase. | 0.773 |
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