STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB44092.1Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. (188 aa)    
Predicted Functional Partners:
SKB28528.1
uroporphyrinogen-III C-methyltransferase.
 
 0.996
CbiF
Cobalt-precorrin 4 C11-methyltransferase.
   
 0.971
SKB66289.1
Sirohydrochlorin cobaltochelatase.
  
  
 0.844
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
   
 0.807
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.660
CbiET
precorrin-6Y C5,15-methyltransferase (decarboxylating).
     
 0.624
SKB48018.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
 
  
 0.614
NirA
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.606
MetH
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.574
HemB
Porphobilinogen synthase; Belongs to the ALAD family.
 
   
 0.559
Your Current Organism:
Arcobacter marinus
NCBI taxonomy Id: 505249
Other names: Arcobacter marinus Kim et al. 2010, Arcobacter sp. CECT 7727, Arcobacter sp. CL-S1, JCM 15502, KCCM 90072, Malacobacter marinus, strain CL-S1
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