STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGQ71413.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (75 aa)    
Predicted Functional Partners:
KGQ71409.1
CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.
       0.403
KGQ71410.1
CRISPR-associated protein Csd2; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.403
KGQ71411.1
CRISPR-associated protein Csd1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.403
KGQ71412.1
CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.403
KGQ71414.1
CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.401
Your Current Organism:
Chelonobacter oris
NCBI taxonomy Id: 505317
Other names: C. oris, CCUG 55632, Chelonobacter oris Gregersen et al. 2009, DSM 21392, Pasteurellaceae bacterium 11321, Pasteurellaceae bacterium 17123, Pasteurellaceae bacterium 18043, Pasteurellaceae bacterium 8484
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.