STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBX06490.1NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)    
Predicted Functional Partners:
OBX09639.1
NAD(P)H oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.655
OBX09930.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.617
OBX06775.1
Pilus assembly protein PilL; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.576
OBX09258.1
NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flavin oxidoreductase frp family.
  
 
 0.539
OBX07861.1
NAD(P)H nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.515
OBX06491.1
Galactitol utilization operon repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.469
OBX06270.1
NADPH quinone reductase MdaB; Involved in drug resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.436
Your Current Organism:
Gallibacterium salpingitidis
NCBI taxonomy Id: 505341
Other names: CCUG 15564, CCUG 36325, G. salpingitidis, Gallibacterium salpingitidis Bisgaard et al. 2009, Gallibacterium sp. 18469/18, Gallibacterium sp. 19987/2, Gallibacterium sp. BK1010/1, Gallibacterium sp. F150, NCTC 11414, strain F150
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