STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGM78801.1PFAM: CreA protein. (155 aa)    
Predicted Functional Partners:
EGM78800.1
PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase.
       0.584
EGM78799.1
Folate-binding protein YgfZ; PFAM: Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ; Belongs to the GcvT family.
       0.568
EGM79426.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2333).
  
    0.525
EGM78798.1
PFAM: Protein of unknown function (DUF339).
       0.409
Your Current Organism:
Rheinheimera sp. A13L
NCBI taxonomy Id: 506534
Other names: R. sp. A13L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.