STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGM77998.1Protein associated with GTPase; PFAM: Domain of unknown function (DUF697). (185 aa)    
Predicted Functional Partners:
EGM78001.1
Membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family.
 
     0.799
EGM78000.1
PFAM: ABC transporter; TIGRFAM: cyclic peptide transporter.
 
     0.783
EGM76578.1
Amino acid adenylation protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
 
     0.661
EGM76581.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
 
     0.490
EGM77997.1
Amino acid adenylation protein; PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720.
 
     0.464
EGM78002.1
ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.
 
     0.460
EGM77999.1
PFAM: Protein of unknown function, DUF481.
       0.455
EGM77996.1
Amino acid adenylation protein; PFAM: Thioesterase domain; Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
 
     0.445
EGM76577.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
 
     0.437
EGM76579.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
 
     0.403
Your Current Organism:
Rheinheimera sp. A13L
NCBI taxonomy Id: 506534
Other names: R. sp. A13L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.